Cluster: HRGMv2_2076_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_00801
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2076_39 | HRGMv2_2076_39_10 | 8751 | 9479 | - | CE4 |
| TC | HRGMv2_2076_39 | HRGMv2_2076_39_11 | 9636 | 11852 | - | 1.B.52.2.2 |
| pfam | HRGMv2_2076_39 | HRGMv2_2076_39_12 | 11955 | 13184 | - | RACo_C_ter | RACo_C_ter | Raco_middle |
| pfam | HRGMv2_2076_39 | HRGMv2_2076_39_13 | 13177 | 13350 | - | DUF4250 |
| TC | HRGMv2_2076_39 | HRGMv2_2076_39_14 | 13449 | 16046 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_2076_39 | HRGMv2_2076_39_15 | 16275 | 16406 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2076_39 | HRGMv2_2076_39_16 | 16608 | 19496 | - | 3.A.3.5.15 |
Gene ID: HRGMv2_2076_39_10
Type: CAZyme
Location: 8751 - 9479 (-)
Type: CAZyme
Location: 8751 - 9479 (-)
Gene ID: HRGMv2_2076_39_11
Type: TC
Location: 9636 - 11852 (-)
Type: TC
Location: 9636 - 11852 (-)
Gene ID: HRGMv2_2076_39_12
Type: pfam
Location: 11955 - 13184 (-)
Type: pfam
Location: 11955 - 13184 (-)
Gene ID: HRGMv2_2076_39_13
Type: pfam
Location: 13177 - 13350 (-)
Type: pfam
Location: 13177 - 13350 (-)
Gene ID: HRGMv2_2076_39_14
Type: TC
Location: 13449 - 16046 (-)
Type: TC
Location: 13449 - 16046 (-)
Gene ID: HRGMv2_2076_39_15
Type:
Location: 16275 - 16406 (-)
Type:
Location: 16275 - 16406 (-)
Gene ID: HRGMv2_2076_39_16
Type: TC
Location: 16608 - 19496 (-)
Type: TC
Location: 16608 - 19496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.