Cluster: HRGMv2_2076_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_36 | HRGMv2_2076_36_1 | 226 | 711 | - | 2.A.115.2.14 |
| CAZyme | HRGMv2_2076_36 | HRGMv2_2076_36_2 | 779 | 1783 | - | GT4 |
| pfam | HRGMv2_2076_36 | HRGMv2_2076_36_3 | 1855 | 2331 | - | VTT_dom |
| CAZyme | HRGMv2_2076_36 | HRGMv2_2076_36_4 | 2399 | 3604 | - | GT4 |
| pfam | HRGMv2_2076_36 | HRGMv2_2076_36_5 | 3795 | 4796 | - | BPD_transp_2 |
| TC | HRGMv2_2076_36 | HRGMv2_2076_36_6 | 4799 | 5902 | - | 3.A.1.2.12 |
| TC | HRGMv2_2076_36 | HRGMv2_2076_36_7 | 5886 | 7430 | - | 3.A.1.2.17 |
Gene ID: HRGMv2_2076_36_1
Type: TC
Location: 226 - 711 (-)
Type: TC
Location: 226 - 711 (-)
Gene ID: HRGMv2_2076_36_2
Type: CAZyme
Location: 779 - 1783 (-)
Type: CAZyme
Location: 779 - 1783 (-)
Gene ID: HRGMv2_2076_36_3
Type: pfam
Location: 1855 - 2331 (-)
Type: pfam
Location: 1855 - 2331 (-)
Gene ID: HRGMv2_2076_36_4
Type: CAZyme
Location: 2399 - 3604 (-)
Type: CAZyme
Location: 2399 - 3604 (-)
Gene ID: HRGMv2_2076_36_5
Type: pfam
Location: 3795 - 4796 (-)
Type: pfam
Location: 3795 - 4796 (-)
Gene ID: HRGMv2_2076_36_6
Type: TC
Location: 4799 - 5902 (-)
Type: TC
Location: 4799 - 5902 (-)
Gene ID: HRGMv2_2076_36_7
Type: TC
Location: 5886 - 7430 (-)
Type: TC
Location: 5886 - 7430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.