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Cluster: HRGMv2_2076_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2076_25 HRGMv2_2076_25_6 6823 8760 + GH13_11
pfam HRGMv2_2076_25 HRGMv2_2076_25_7 8770 9342 + DUF5662
NULL(UNKNOWN) HRGMv2_2076_25 HRGMv2_2076_25_8 9377 9619 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2076_25 HRGMv2_2076_25_9 9689 10753 - 3.A.1.11.7
TC HRGMv2_2076_25 HRGMv2_2076_25_10 10784 11560 - 3.A.1.11.1
TC HRGMv2_2076_25 HRGMv2_2076_25_11 11557 12369 - 3.A.1.11.8
TC HRGMv2_2076_25 HRGMv2_2076_25_12 12362 13435 - 3.A.1.11.8
pfam HRGMv2_2076_25 HRGMv2_2076_25_13 13707 14759 + Lactonase
pfam HRGMv2_2076_25 HRGMv2_2076_25_14 15064 16305 + DUF1015
CAZyme HRGMv2_2076_25 HRGMv2_2076_25_15 16375 18711 + CBM48 | GH13_9
TC HRGMv2_2076_25 HRGMv2_2076_25_16 18718 19575 + 1.A.23.2.1
TC HRGMv2_2076_25 HRGMv2_2076_25_17 19669 20850 + 3.A.1.2.17
TC HRGMv2_2076_25 HRGMv2_2076_25_18 20931 22475 + 3.A.1.2.12
TC HRGMv2_2076_25 HRGMv2_2076_25_19 22480 23586 + 3.A.1.2.17
TC HRGMv2_2076_25 HRGMv2_2076_25_20 23587 24546 + 3.A.1.2.12
pfam HRGMv2_2076_25 HRGMv2_2076_25_21 24871 25692 - BPD_transp_1
TC HRGMv2_2076_25 HRGMv2_2076_25_22 25682 26449 - 3.A.1.17.8
pfam HRGMv2_2076_25 HRGMv2_2076_25_23 26649 28070 + Lyase_1 | ASL_C2
pfam HRGMv2_2076_25 HRGMv2_2076_25_24 28134 29219 + Semialdhyde_dh | Semialdhyde_dhC
TC HRGMv2_2076_25 HRGMv2_2076_25_25 29235 30953 + 9.B.34.1.2
TC HRGMv2_2076_25 HRGMv2_2076_25_26 30950 33079 + 3.A.7.7.1
NULL(UNKNOWN) HRGMv2_2076_25 HRGMv2_2076_25_27 33105 33776 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2076_25 HRGMv2_2076_25_28 33934 34950 + ABC_sub_bind
TC HRGMv2_2076_25 HRGMv2_2076_25_29 35047 35991 + 3.A.1.34.1
TC HRGMv2_2076_25 HRGMv2_2076_25_30 35991 36794 + 3.A.1.34.1
Gene ID: HRGMv2_2076_25_6
Type: CAZyme
Location: 6823 - 8760 (+)
Gene ID: HRGMv2_2076_25_7
Type: pfam
Location: 8770 - 9342 (+)
Gene ID: HRGMv2_2076_25_8
Type:
Location: 9377 - 9619 (+)
Gene ID: HRGMv2_2076_25_9
Type: TC
Location: 9689 - 10753 (-)
Gene ID: HRGMv2_2076_25_10
Type: TC
Location: 10784 - 11560 (-)
Gene ID: HRGMv2_2076_25_11
Type: TC
Location: 11557 - 12369 (-)
Gene ID: HRGMv2_2076_25_12
Type: TC
Location: 12362 - 13435 (-)
Gene ID: HRGMv2_2076_25_13
Type: pfam
Location: 13707 - 14759 (+)
Gene ID: HRGMv2_2076_25_14
Type: pfam
Location: 15064 - 16305 (+)
Gene ID: HRGMv2_2076_25_15
Type: CAZyme
Location: 16375 - 18711 (+)
Gene ID: HRGMv2_2076_25_16
Type: TC
Location: 18718 - 19575 (+)
Gene ID: HRGMv2_2076_25_17
Type: TC
Location: 19669 - 20850 (+)
Gene ID: HRGMv2_2076_25_18
Type: TC
Location: 20931 - 22475 (+)
Gene ID: HRGMv2_2076_25_19
Type: TC
Location: 22480 - 23586 (+)
Gene ID: HRGMv2_2076_25_20
Type: TC
Location: 23587 - 24546 (+)
Gene ID: HRGMv2_2076_25_21
Type: pfam
Location: 24871 - 25692 (-)
Gene ID: HRGMv2_2076_25_22
Type: TC
Location: 25682 - 26449 (-)
Gene ID: HRGMv2_2076_25_23
Type: pfam
Location: 26649 - 28070 (+)
Gene ID: HRGMv2_2076_25_24
Type: pfam
Location: 28134 - 29219 (+)
Gene ID: HRGMv2_2076_25_25
Type: TC
Location: 29235 - 30953 (+)
Gene ID: HRGMv2_2076_25_26
Type: TC
Location: 30950 - 33079 (+)
Gene ID: HRGMv2_2076_25_27
Type:
Location: 33105 - 33776 (+)
Gene ID: HRGMv2_2076_25_28
Type: pfam
Location: 33934 - 34950 (+)
Gene ID: HRGMv2_2076_25_29
Type: TC
Location: 35047 - 35991 (+)
Gene ID: HRGMv2_2076_25_30
Type: TC
Location: 35991 - 36794 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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