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Cluster: HRGMv2_2076_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2076_19 HRGMv2_2076_19_19 19472 20365 + 3.A.1.1.25
TC HRGMv2_2076_19 HRGMv2_2076_19_20 20355 21197 + 3.A.1.1.41
pfam HRGMv2_2076_19 HRGMv2_2076_19_21 21219 22433 + MR_MLE_N | MR_MLE_C
STP HRGMv2_2076_19 HRGMv2_2076_19_22 22736 22993 + PTS-HPr
TC HRGMv2_2076_19 HRGMv2_2076_19_23 23030 24649 + 8.A.7.1.1
sulfatase HRGMv2_2076_19 HRGMv2_2076_19_24 24657 25388 + S1_9
CAZyme HRGMv2_2076_19 HRGMv2_2076_19_25 25410 26540 + CE9
TC HRGMv2_2076_19 HRGMv2_2076_19_26 26534 27013 + 4.A.1.2.11
TC HRGMv2_2076_19 HRGMv2_2076_19_27 27091 28560 + 4.A.1.1.7
Gene ID: HRGMv2_2076_19_19
Type: TC
Location: 19472 - 20365 (+)
Gene ID: HRGMv2_2076_19_20
Type: TC
Location: 20355 - 21197 (+)
Gene ID: HRGMv2_2076_19_21
Type: pfam
Location: 21219 - 22433 (+)
Gene ID: HRGMv2_2076_19_22
Type: STP
Location: 22736 - 22993 (+)
Gene ID: HRGMv2_2076_19_23
Type: TC
Location: 23030 - 24649 (+)
Gene ID: HRGMv2_2076_19_24
Type: sulfatase
Location: 24657 - 25388 (+)
Gene ID: HRGMv2_2076_19_25
Type: CAZyme
Location: 25410 - 26540 (+)
Gene ID: HRGMv2_2076_19_26
Type: TC
Location: 26534 - 27013 (+)
Gene ID: HRGMv2_2076_19_27
Type: TC
Location: 27091 - 28560 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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