Cluster: HRGMv2_2076_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_04035
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_16 | HRGMv2_2076_16_8 | 5794 | 6540 | - | 9.B.158.1.1 |
| TC | HRGMv2_2076_16 | HRGMv2_2076_16_9 | 6558 | 8111 | - | 3.A.1.121.4 |
| pfam | HRGMv2_2076_16 | HRGMv2_2076_16_10 | 8449 | 9072 | + | DUF4358 |
| TC | HRGMv2_2076_16 | HRGMv2_2076_16_11 | 9089 | 10504 | + | 2.A.50.2.1 |
| pfam | HRGMv2_2076_16 | HRGMv2_2076_16_12 | 10525 | 11643 | + | DHHW | ALGX |
| pfam | HRGMv2_2076_16 | HRGMv2_2076_16_13 | 11684 | 12538 | + | RrnaAD | Methyltransf_11 | Methyltransf_25 |
| CAZyme | HRGMv2_2076_16 | HRGMv2_2076_16_14 | 12551 | 13627 | - | GT28 |
Gene ID: HRGMv2_2076_16_8
Type: TC
Location: 5794 - 6540 (-)
Type: TC
Location: 5794 - 6540 (-)
Gene ID: HRGMv2_2076_16_9
Type: TC
Location: 6558 - 8111 (-)
Type: TC
Location: 6558 - 8111 (-)
Gene ID: HRGMv2_2076_16_10
Type: pfam
Location: 8449 - 9072 (+)
Type: pfam
Location: 8449 - 9072 (+)
Gene ID: HRGMv2_2076_16_11
Type: TC
Location: 9089 - 10504 (+)
Type: TC
Location: 9089 - 10504 (+)
Gene ID: HRGMv2_2076_16_12
Type: pfam
Location: 10525 - 11643 (+)
Type: pfam
Location: 10525 - 11643 (+)
Gene ID: HRGMv2_2076_16_13
Type: pfam
Location: 11684 - 12538 (+)
Type: pfam
Location: 11684 - 12538 (+)
Gene ID: HRGMv2_2076_16_14
Type: CAZyme
Location: 12551 - 13627 (-)
Type: CAZyme
Location: 12551 - 13627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.