Cluster: HRGMv2_2076_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_01023
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2076_14 | HRGMv2_2076_14_11 | 9991 | 10956 | + | GH26 |
| pfam | HRGMv2_2076_14 | HRGMv2_2076_14_12 | 10989 | 11627 | - | PBECR4 |
| pfam | HRGMv2_2076_14 | HRGMv2_2076_14_13 | 11938 | 12198 | - | HicB_lk_antitox |
| TC | HRGMv2_2076_14 | HRGMv2_2076_14_14 | 12493 | 14184 | + | 3.A.15.4.1 |
| TC | HRGMv2_2076_14 | HRGMv2_2076_14_15 | 14328 | 15542 | + | 3.A.15.2.1 |
| pfam | HRGMv2_2076_14 | HRGMv2_2076_14_16 | 15650 | 16108 | + | N_methyl |
| TC | HRGMv2_2076_14 | HRGMv2_2076_14_17 | 16128 | 16883 | + | 3.A.15.2.1 |
Gene ID: HRGMv2_2076_14_11
Type: CAZyme
Location: 9991 - 10956 (+)
Type: CAZyme
Location: 9991 - 10956 (+)
Gene ID: HRGMv2_2076_14_12
Type: pfam
Location: 10989 - 11627 (-)
Type: pfam
Location: 10989 - 11627 (-)
Gene ID: HRGMv2_2076_14_13
Type: pfam
Location: 11938 - 12198 (-)
Type: pfam
Location: 11938 - 12198 (-)
Gene ID: HRGMv2_2076_14_14
Type: TC
Location: 12493 - 14184 (+)
Type: TC
Location: 12493 - 14184 (+)
Gene ID: HRGMv2_2076_14_15
Type: TC
Location: 14328 - 15542 (+)
Type: TC
Location: 14328 - 15542 (+)
Gene ID: HRGMv2_2076_14_16
Type: pfam
Location: 15650 - 16108 (+)
Type: pfam
Location: 15650 - 16108 (+)
Gene ID: HRGMv2_2076_14_17
Type: TC
Location: 16128 - 16883 (+)
Type: TC
Location: 16128 - 16883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.