Cluster: HRGMv2_2076_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_12 | HRGMv2_2076_12_9 | 7193 | 8593 | + | 9.A.40.2.1 |
| peptidase | HRGMv2_2076_12 | HRGMv2_2076_12_10 | 8675 | 9403 | + | M20.UNW |
| CAZyme | HRGMv2_2076_12 | HRGMv2_2076_12_11 | 9424 | 10368 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2076_12 | HRGMv2_2076_12_12 | 10368 | 11891 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2076_12 | HRGMv2_2076_12_13 | 12008 | 12745 | + | S14.UPW |
| TC | HRGMv2_2076_12 | HRGMv2_2076_12_14 | 12895 | 15732 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2076_12_9
Type: TC
Location: 7193 - 8593 (+)
Type: TC
Location: 7193 - 8593 (+)
Gene ID: HRGMv2_2076_12_10
Type: peptidase
Location: 8675 - 9403 (+)
Type: peptidase
Location: 8675 - 9403 (+)
Gene ID: HRGMv2_2076_12_11
Type: CAZyme
Location: 9424 - 10368 (+)
Type: CAZyme
Location: 9424 - 10368 (+)
Gene ID: HRGMv2_2076_12_12
Type:
Location: 10368 - 11891 (+)
Type:
Location: 10368 - 11891 (+)
Gene ID: HRGMv2_2076_12_13
Type: peptidase
Location: 12008 - 12745 (+)
Type: peptidase
Location: 12008 - 12745 (+)
Gene ID: HRGMv2_2076_12_14
Type: TC
Location: 12895 - 15732 (+)
Type: TC
Location: 12895 - 15732 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.