Cluster: HRGMv2_2076_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_2 | 1390 | 2709 | + | 3.D.6.1.2 |
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_3 | 2722 | 3663 | + | 3.D.6.1.2 |
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_4 | 3653 | 4279 | + | 3.D.6.1.2 |
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_5 | 4272 | 5069 | + | 3.D.6.1.2 |
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_6 | 5070 | 5654 | + | 3.D.6.1.2 |
| TC | HRGMv2_2076_1 | HRGMv2_2076_1_7 | 5670 | 6467 | + | 3.D.6.1.2 |
| CAZyme | HRGMv2_2076_1 | HRGMv2_2076_1_8 | 6483 | 7604 | + | GH25 |
Gene ID: HRGMv2_2076_1_2
Type: TC
Location: 1390 - 2709 (+)
Type: TC
Location: 1390 - 2709 (+)
Gene ID: HRGMv2_2076_1_3
Type: TC
Location: 2722 - 3663 (+)
Type: TC
Location: 2722 - 3663 (+)
Gene ID: HRGMv2_2076_1_4
Type: TC
Location: 3653 - 4279 (+)
Type: TC
Location: 3653 - 4279 (+)
Gene ID: HRGMv2_2076_1_5
Type: TC
Location: 4272 - 5069 (+)
Type: TC
Location: 4272 - 5069 (+)
Gene ID: HRGMv2_2076_1_6
Type: TC
Location: 5070 - 5654 (+)
Type: TC
Location: 5070 - 5654 (+)
Gene ID: HRGMv2_2076_1_7
Type: TC
Location: 5670 - 6467 (+)
Type: TC
Location: 5670 - 6467 (+)
Gene ID: HRGMv2_2076_1_8
Type: CAZyme
Location: 6483 - 7604 (+)
Type: CAZyme
Location: 6483 - 7604 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.