Cluster: HRGMv2_2071_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2071
- CGC Family ID: CGCFAM_00586
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2071_38 | HRGMv2_2071_38_2 | 992 | 2383 | - | GH1 |
| TC | HRGMv2_2071_38 | HRGMv2_2071_38_3 | 2393 | 2995 | - | 9.B.28.1.3 |
| NULL(UNKNOWN) | HRGMv2_2071_38 | HRGMv2_2071_38_4 | 2992 | 3651 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2071_38 | HRGMv2_2071_38_5 | 3745 | 4920 | - | GH130_1 |
| pfam | HRGMv2_2071_38 | HRGMv2_2071_38_6 | 4924 | 6117 | - | GlcNAc_2-epim |
| CAZyme | HRGMv2_2071_38 | HRGMv2_2071_38_7 | 6119 | 7141 | - | GH130_2 |
| TC | HRGMv2_2071_38 | HRGMv2_2071_38_8 | 7271 | 8113 | - | 3.A.1.1.34 |
| TC | HRGMv2_2071_38 | HRGMv2_2071_38_9 | 8110 | 9129 | - | 3.A.1.1.11 |
| STP | HRGMv2_2071_38 | HRGMv2_2071_38_10 | 9289 | 10674 | - | SBP_bac_1 |
| TF | HRGMv2_2071_38 | HRGMv2_2071_38_11 | 11322 | 12338 | - | LacI |
| CAZyme | HRGMv2_2071_38 | HRGMv2_2071_38_12 | 12511 | 14700 | - | GH36 |
Gene ID: HRGMv2_2071_38_2
Type: CAZyme
Location: 992 - 2383 (-)
Type: CAZyme
Location: 992 - 2383 (-)
Gene ID: HRGMv2_2071_38_3
Type: TC
Location: 2393 - 2995 (-)
Type: TC
Location: 2393 - 2995 (-)
Gene ID: HRGMv2_2071_38_4
Type:
Location: 2992 - 3651 (-)
Type:
Location: 2992 - 3651 (-)
Gene ID: HRGMv2_2071_38_5
Type: CAZyme
Location: 3745 - 4920 (-)
Type: CAZyme
Location: 3745 - 4920 (-)
Gene ID: HRGMv2_2071_38_6
Type: pfam
Location: 4924 - 6117 (-)
Type: pfam
Location: 4924 - 6117 (-)
Gene ID: HRGMv2_2071_38_7
Type: CAZyme
Location: 6119 - 7141 (-)
Type: CAZyme
Location: 6119 - 7141 (-)
Gene ID: HRGMv2_2071_38_8
Type: TC
Location: 7271 - 8113 (-)
Type: TC
Location: 7271 - 8113 (-)
Gene ID: HRGMv2_2071_38_9
Type: TC
Location: 8110 - 9129 (-)
Type: TC
Location: 8110 - 9129 (-)
Gene ID: HRGMv2_2071_38_10
Type: STP
Location: 9289 - 10674 (-)
Type: STP
Location: 9289 - 10674 (-)
Gene ID: HRGMv2_2071_38_11
Type: TF
Location: 11322 - 12338 (-)
Type: TF
Location: 11322 - 12338 (-)
Gene ID: HRGMv2_2071_38_12
Type: CAZyme
Location: 12511 - 14700 (-)
Type: CAZyme
Location: 12511 - 14700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2071_38_7 | vegetarian > vegan | 1.45764 | 0.02695 |