Cluster: HRGMv2_2071_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2071
- CGC Family ID: CGCFAM_03807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2071_95 | HRGMv2_2071_95_4 | 3578 | 4885 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2071_95 | HRGMv2_2071_95_5 | 5059 | 6147 | - | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2071_95 | HRGMv2_2071_95_6 | 6351 | 7085 | - | 3.A.1.1.46 |
| CAZyme | HRGMv2_2071_95 | HRGMv2_2071_95_7 | 7384 | 8244 | - | GT26 |
Gene ID: HRGMv2_2071_95_4
Type: TC
Location: 3578 - 4885 (-)
Type: TC
Location: 3578 - 4885 (-)
Gene ID: HRGMv2_2071_95_5
Type: pfam
Location: 5059 - 6147 (-)
Type: pfam
Location: 5059 - 6147 (-)
Gene ID: HRGMv2_2071_95_6
Type: TC
Location: 6351 - 7085 (-)
Type: TC
Location: 6351 - 7085 (-)
Gene ID: HRGMv2_2071_95_7
Type: CAZyme
Location: 7384 - 8244 (-)
Type: CAZyme
Location: 7384 - 8244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2071_95_7 | vegan > omnivore | 2.31697 | 0.02248 |