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Cluster: HRGMv2_2067_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2067_5 HRGMv2_2067_5_44 39987 40805 - CE4
pfam HRGMv2_2067_5 HRGMv2_2067_5_45 40798 41649 - Polysacc_deac_1
sulfatase HRGMv2_2067_5 HRGMv2_2067_5_46 41664 42425 - S1_6
TC HRGMv2_2067_5 HRGMv2_2067_5_47 42446 43174 - 3.A.1.4.10
TC HRGMv2_2067_5 HRGMv2_2067_5_48 43146 43925 - 3.A.1.4.10
TC HRGMv2_2067_5 HRGMv2_2067_5_49 43931 44830 - 3.A.1.4.10
TC HRGMv2_2067_5 HRGMv2_2067_5_50 44844 45719 - 3.A.1.4.10
Gene ID: HRGMv2_2067_5_44
Type: CAZyme
Location: 39987 - 40805 (-)
Gene ID: HRGMv2_2067_5_45
Type: pfam
Location: 40798 - 41649 (-)
Gene ID: HRGMv2_2067_5_46
Type: sulfatase
Location: 41664 - 42425 (-)
Gene ID: HRGMv2_2067_5_47
Type: TC
Location: 42446 - 43174 (-)
Gene ID: HRGMv2_2067_5_48
Type: TC
Location: 43146 - 43925 (-)
Gene ID: HRGMv2_2067_5_49
Type: TC
Location: 43931 - 44830 (-)
Gene ID: HRGMv2_2067_5_50
Type: TC
Location: 44844 - 45719 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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