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Cluster: HRGMv2_2067_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2067_127 HRGMv2_2067_127_1 184 2910 + GT51
pfam HRGMv2_2067_127 HRGMv2_2067_127_2 3027 3380 - SpoVAC_SpoVAEB
pfam HRGMv2_2067_127 HRGMv2_2067_127_3 3430 4467 - SpoVAD
TC HRGMv2_2067_127 HRGMv2_2067_127_4 4654 5733 - 3.A.3.32.3
TC HRGMv2_2067_127 HRGMv2_2067_127_5 5730 6779 - 3.A.3.32.3
Gene ID: HRGMv2_2067_127_1
Type: CAZyme
Location: 184 - 2910 (+)
Gene ID: HRGMv2_2067_127_2
Type: pfam
Location: 3027 - 3380 (-)
Gene ID: HRGMv2_2067_127_3
Type: pfam
Location: 3430 - 4467 (-)
Gene ID: HRGMv2_2067_127_4
Type: TC
Location: 4654 - 5733 (-)
Gene ID: HRGMv2_2067_127_5
Type: TC
Location: 5730 - 6779 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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