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Cluster: HRGMv2_2067_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2067_30 HRGMv2_2067_30_6 4066 5073 - 2.A.56.1.5
pfam HRGMv2_2067_30 HRGMv2_2067_30_7 5148 5633 - YcxB
TC HRGMv2_2067_30 HRGMv2_2067_30_8 6079 7095 - 8.A.59.2.1
CAZyme HRGMv2_2067_30 HRGMv2_2067_30_9 7208 9802 - CBM48 | GH13_9
pfam HRGMv2_2067_30 HRGMv2_2067_30_10 9841 10305 - MGS
sulfatase HRGMv2_2067_30 HRGMv2_2067_30_11 10382 11278 - S1_56
TC HRGMv2_2067_30 HRGMv2_2067_30_12 11397 14030 - 3.A.3.2.21
peptidase HRGMv2_2067_30 HRGMv2_2067_30_13 14206 15357 - M20.UPW
CAZyme HRGMv2_2067_30 HRGMv2_2067_30_14 15384 17420 - GH13_11
TC HRGMv2_2067_30 HRGMv2_2067_30_15 17450 19327 - 3.A.1.120.6
pfam HRGMv2_2067_30 HRGMv2_2067_30_16 19436 20194 - Exo_endo_phos
pfam HRGMv2_2067_30 HRGMv2_2067_30_17 20223 20708 - LuxS
TC HRGMv2_2067_30 HRGMv2_2067_30_18 20926 22623 - 3.A.1.121.4
TC HRGMv2_2067_30 HRGMv2_2067_30_19 22878 23552 - 9.B.20.1.4
TF HRGMv2_2067_30 HRGMv2_2067_30_20 23680 25059 - HTH_AraC
TC HRGMv2_2067_30 HRGMv2_2067_30_21 25037 26770 - 8.A.59.2.1
STP HRGMv2_2067_30 HRGMv2_2067_30_22 26946 28277 - SBP_bac_1
TC HRGMv2_2067_30 HRGMv2_2067_30_23 28350 29195 - 3.A.1.1.39
TC HRGMv2_2067_30 HRGMv2_2067_30_24 29276 30178 - 3.A.1.1.20
TC HRGMv2_2067_30 HRGMv2_2067_30_25 30182 31237 - 3.A.1.1.26
Gene ID: HRGMv2_2067_30_6
Type: TC
Location: 4066 - 5073 (-)
Gene ID: HRGMv2_2067_30_7
Type: pfam
Location: 5148 - 5633 (-)
Gene ID: HRGMv2_2067_30_8
Type: TC
Location: 6079 - 7095 (-)
Gene ID: HRGMv2_2067_30_9
Type: CAZyme
Location: 7208 - 9802 (-)
Gene ID: HRGMv2_2067_30_10
Type: pfam
Location: 9841 - 10305 (-)
Gene ID: HRGMv2_2067_30_11
Type: sulfatase
Location: 10382 - 11278 (-)
Gene ID: HRGMv2_2067_30_12
Type: TC
Location: 11397 - 14030 (-)
Gene ID: HRGMv2_2067_30_13
Type: peptidase
Location: 14206 - 15357 (-)
Gene ID: HRGMv2_2067_30_14
Type: CAZyme
Location: 15384 - 17420 (-)
Gene ID: HRGMv2_2067_30_15
Type: TC
Location: 17450 - 19327 (-)
Gene ID: HRGMv2_2067_30_16
Type: pfam
Location: 19436 - 20194 (-)
Gene ID: HRGMv2_2067_30_17
Type: pfam
Location: 20223 - 20708 (-)
Gene ID: HRGMv2_2067_30_18
Type: TC
Location: 20926 - 22623 (-)
Gene ID: HRGMv2_2067_30_19
Type: TC
Location: 22878 - 23552 (-)
Gene ID: HRGMv2_2067_30_20
Type: TF
Location: 23680 - 25059 (-)
Gene ID: HRGMv2_2067_30_21
Type: TC
Location: 25037 - 26770 (-)
Gene ID: HRGMv2_2067_30_22
Type: STP
Location: 26946 - 28277 (-)
Gene ID: HRGMv2_2067_30_23
Type: TC
Location: 28350 - 29195 (-)
Gene ID: HRGMv2_2067_30_24
Type: TC
Location: 29276 - 30178 (-)
Gene ID: HRGMv2_2067_30_25
Type: TC
Location: 30182 - 31237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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