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Cluster: HRGMv2_2067_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2067_2 HRGMv2_2067_2_59 69681 71504 + 8.A.59.2.1
TF HRGMv2_2067_2 HRGMv2_2067_2_60 71508 72746 + HTH_AraC
TC HRGMv2_2067_2 HRGMv2_2067_2_61 72888 73790 + 3.A.1.1.7
TC HRGMv2_2067_2 HRGMv2_2067_2_62 73787 74629 + 3.A.1.1.12
CAZyme HRGMv2_2067_2 HRGMv2_2067_2_63 74641 77805 + GH38
Gene ID: HRGMv2_2067_2_59
Type: TC
Location: 69681 - 71504 (+)
Gene ID: HRGMv2_2067_2_60
Type: TF
Location: 71508 - 72746 (+)
Gene ID: HRGMv2_2067_2_61
Type: TC
Location: 72888 - 73790 (+)
Gene ID: HRGMv2_2067_2_62
Type: TC
Location: 73787 - 74629 (+)
Gene ID: HRGMv2_2067_2_63
Type: CAZyme
Location: 74641 - 77805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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