dbCAN Logo

Cluster: HRGMv2_2067_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2067_26 HRGMv2_2067_26_1 35 457 + 4.A.1.1.16
CAZyme HRGMv2_2067_26 HRGMv2_2067_26_2 477 1811 + GH4
TC HRGMv2_2067_26 HRGMv2_2067_26_3 1824 2306 + 4.A.1.1.13
TC HRGMv2_2067_26 HRGMv2_2067_26_4 2401 4656 - 5.A.3.3.2
TC HRGMv2_2067_26 HRGMv2_2067_26_5 4900 5841 + 3.A.1.24.5
TC HRGMv2_2067_26 HRGMv2_2067_26_6 6132 7106 + 3.A.1.24.2
TC HRGMv2_2067_26 HRGMv2_2067_26_7 7099 7734 + 3.A.1.24.5
NULL(UNKNOWN) HRGMv2_2067_26 HRGMv2_2067_26_8 7731 7979 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2067_26 HRGMv2_2067_26_9 7972 10347 - 9.A.8.1.6
TC HRGMv2_2067_26 HRGMv2_2067_26_10 10477 12012 - 2.A.21.2.5
Gene ID: HRGMv2_2067_26_1
Type: TC
Location: 35 - 457 (+)
Gene ID: HRGMv2_2067_26_2
Type: CAZyme
Location: 477 - 1811 (+)
Gene ID: HRGMv2_2067_26_3
Type: TC
Location: 1824 - 2306 (+)
Gene ID: HRGMv2_2067_26_4
Type: TC
Location: 2401 - 4656 (-)
Gene ID: HRGMv2_2067_26_5
Type: TC
Location: 4900 - 5841 (+)
Gene ID: HRGMv2_2067_26_6
Type: TC
Location: 6132 - 7106 (+)
Gene ID: HRGMv2_2067_26_7
Type: TC
Location: 7099 - 7734 (+)
Gene ID: HRGMv2_2067_26_8
Type:
Location: 7731 - 7979 (+)
Gene ID: HRGMv2_2067_26_9
Type: TC
Location: 7972 - 10347 (-)
Gene ID: HRGMv2_2067_26_10
Type: TC
Location: 10477 - 12012 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List