dbCAN Logo

Cluster: HRGMv2_2067_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2067_1 HRGMv2_2067_1_38 37304 38884 + 3.A.1.2.17
pfam HRGMv2_2067_1 HRGMv2_2067_1_39 38899 39936 + BPD_transp_2
pfam HRGMv2_2067_1 HRGMv2_2067_1_40 39933 41156 + BPD_transp_2
CAZyme HRGMv2_2067_1 HRGMv2_2067_1_41 41197 42348 + CE15
NULL(UNKNOWN) HRGMv2_2067_1 HRGMv2_2067_1_42 42637 43065 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2067_1 HRGMv2_2067_1_43 43310 44236 + SBP_bac_1 | PBP_like | PBP_like_2 | SBP_bac_11
TC HRGMv2_2067_1 HRGMv2_2067_1_44 44278 45210 + 3.A.1.7.5
TC HRGMv2_2067_1 HRGMv2_2067_1_45 45207 46109 + 3.A.1.7.5
TC HRGMv2_2067_1 HRGMv2_2067_1_46 46177 46938 + 3.A.1.7.5
Gene ID: HRGMv2_2067_1_38
Type: TC
Location: 37304 - 38884 (+)
Gene ID: HRGMv2_2067_1_39
Type: pfam
Location: 38899 - 39936 (+)
Gene ID: HRGMv2_2067_1_40
Type: pfam
Location: 39933 - 41156 (+)
Gene ID: HRGMv2_2067_1_41
Type: CAZyme
Location: 41197 - 42348 (+)
Gene ID: HRGMv2_2067_1_42
Type:
Location: 42637 - 43065 (+)
Gene ID: HRGMv2_2067_1_43
Type: pfam
Location: 43310 - 44236 (+)
Gene ID: HRGMv2_2067_1_44
Type: TC
Location: 44278 - 45210 (+)
Gene ID: HRGMv2_2067_1_45
Type: TC
Location: 45207 - 46109 (+)
Gene ID: HRGMv2_2067_1_46
Type: TC
Location: 46177 - 46938 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List