Cluster: HRGMv2_2055_CGC69
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_09415
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_71 | HRGMv2_2055_71_74 | 89524 | 92379 | - | GH2 |
| pfam | HRGMv2_2055_71 | HRGMv2_2055_71_75 | 92406 | 95708 | - | TPR_8 | TPR_8 | TPR_8 | DUF5107 |
| TF | HRGMv2_2055_71 | HRGMv2_2055_71_76 | 95987 | 96826 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2055_71 | HRGMv2_2055_71_77 | 96927 | 98213 | + | 2.A.49.9.2 |
Gene ID: HRGMv2_2055_71_74
Type: CAZyme
Location: 89524 - 92379 (-)
Type: CAZyme
Location: 89524 - 92379 (-)
Gene ID: HRGMv2_2055_71_75
Type: pfam
Location: 92406 - 95708 (-)
Type: pfam
Location: 92406 - 95708 (-)
Gene ID: HRGMv2_2055_71_76
Type: TF
Location: 95987 - 96826 (+)
Type: TF
Location: 95987 - 96826 (+)
Gene ID: HRGMv2_2055_71_77
Type: TC
Location: 96927 - 98213 (+)
Type: TC
Location: 96927 - 98213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_71_74 | vegan > omnivore | 1.10752 | 0.00701 |