Cluster: HRGMv2_2055_CGC63
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_65 | HRGMv2_2055_65_225 | 236404 | 238566 | - | GH112 |
| CAZyme | HRGMv2_2055_65 | HRGMv2_2055_65_226 | 238621 | 239934 | - | GH136 |
| NULL(UNKNOWN) | HRGMv2_2055_65 | HRGMv2_2055_65_227 | 239894 | 240358 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2055_65 | HRGMv2_2055_65_228 | 240358 | 241164 | - | 3.A.1.1.4 |
| TC | HRGMv2_2055_65 | HRGMv2_2055_65_229 | 241157 | 242047 | - | 3.A.1.1.4 |
| TC | HRGMv2_2055_65 | HRGMv2_2055_65_230 | 242204 | 243499 | - | 3.A.1.1.4 |
Gene ID: HRGMv2_2055_65_225
Type: CAZyme
Location: 236404 - 238566 (-)
Type: CAZyme
Location: 236404 - 238566 (-)
Gene ID: HRGMv2_2055_65_226
Type: CAZyme
Location: 238621 - 239934 (-)
Type: CAZyme
Location: 238621 - 239934 (-)
Gene ID: HRGMv2_2055_65_227
Type:
Location: 239894 - 240358 (-)
Type:
Location: 239894 - 240358 (-)
Gene ID: HRGMv2_2055_65_228
Type: TC
Location: 240358 - 241164 (-)
Type: TC
Location: 240358 - 241164 (-)
Gene ID: HRGMv2_2055_65_229
Type: TC
Location: 241157 - 242047 (-)
Type: TC
Location: 241157 - 242047 (-)
Gene ID: HRGMv2_2055_65_230
Type: TC
Location: 242204 - 243499 (-)
Type: TC
Location: 242204 - 243499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_65_227 | vegetarian > vegan | 1.05594 | 0.03568 |
| HRGMv2_2055_65_228 | vegetarian > vegan | 1.27918 | 0.00229 |
| HRGMv2_2055_65_230 | vegetarian > vegan | 1.98909 | 0.00229 |