Cluster: HRGMv2_2055_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_09943
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2055_8 | HRGMv2_2055_8_65 | 72588 | 73565 | + | 3.A.1.1.29 |
| TC | HRGMv2_2055_8 | HRGMv2_2055_8_66 | 73584 | 74510 | + | 3.A.1.1.29 |
| pfam | HRGMv2_2055_8 | HRGMv2_2055_8_67 | 74525 | 77233 | + | DUF5695 | DUF5695 |
| CAZyme | HRGMv2_2055_8 | HRGMv2_2055_8_68 | 77307 | 79256 | + | GH127 |
| STP | HRGMv2_2055_8 | HRGMv2_2055_8_69 | 79423 | 81039 | - | CbiA |
| TC | HRGMv2_2055_8 | HRGMv2_2055_8_70 | 81317 | 83206 | + | 3.A.16.1.2 |
Gene ID: HRGMv2_2055_8_65
Type: TC
Location: 72588 - 73565 (+)
Type: TC
Location: 72588 - 73565 (+)
Gene ID: HRGMv2_2055_8_66
Type: TC
Location: 73584 - 74510 (+)
Type: TC
Location: 73584 - 74510 (+)
Gene ID: HRGMv2_2055_8_67
Type: pfam
Location: 74525 - 77233 (+)
Type: pfam
Location: 74525 - 77233 (+)
Gene ID: HRGMv2_2055_8_68
Type: CAZyme
Location: 77307 - 79256 (+)
Type: CAZyme
Location: 77307 - 79256 (+)
Gene ID: HRGMv2_2055_8_69
Type: STP
Location: 79423 - 81039 (-)
Type: STP
Location: 79423 - 81039 (-)
Gene ID: HRGMv2_2055_8_70
Type: TC
Location: 81317 - 83206 (+)
Type: TC
Location: 81317 - 83206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.