dbCAN Logo

Cluster: HRGMv2_2055_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_59 HRGMv2_2055_59_77 95545 96534 + 3.A.1.1.7
TC HRGMv2_2055_59 HRGMv2_2055_59_78 96547 97392 + 3.A.1.1.34
CAZyme HRGMv2_2055_59 HRGMv2_2055_59_79 97477 98499 + GH130_2
pfam HRGMv2_2055_59 HRGMv2_2055_59_80 98524 99702 + GlcNAc_2-epim
CAZyme HRGMv2_2055_59 HRGMv2_2055_59_81 99735 100919 + GH130_1
CAZyme HRGMv2_2055_59 HRGMv2_2055_59_82 100948 102048 + CBM35inCE17 | CE17
pfam HRGMv2_2055_59 HRGMv2_2055_59_83 102128 103852 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_2055_59 HRGMv2_2055_59_84 103935 104996 + CE2
CAZyme HRGMv2_2055_59 HRGMv2_2055_59_85 105078 106439 + GH1
Gene ID: HRGMv2_2055_59_77
Type: TC
Location: 95545 - 96534 (+)
Gene ID: HRGMv2_2055_59_78
Type: TC
Location: 96547 - 97392 (+)
Gene ID: HRGMv2_2055_59_79
Type: CAZyme
Location: 97477 - 98499 (+)
Gene ID: HRGMv2_2055_59_80
Type: pfam
Location: 98524 - 99702 (+)
Gene ID: HRGMv2_2055_59_81
Type: CAZyme
Location: 99735 - 100919 (+)
Gene ID: HRGMv2_2055_59_82
Type: CAZyme
Location: 100948 - 102048 (+)
Gene ID: HRGMv2_2055_59_83
Type: pfam
Location: 102128 - 103852 (+)
Gene ID: HRGMv2_2055_59_84
Type: CAZyme
Location: 103935 - 104996 (+)
Gene ID: HRGMv2_2055_59_85
Type: CAZyme
Location: 105078 - 106439 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2055_59_77 vegetarian > omnivore 1.19230 0.01089
HRGMv2_2055_59_81 vegetarian > vegan 1.36532 0.00229

🧭 Explore Read Mapping of CGC

← Back to Cluster List