Cluster: HRGMv2_2055_CGC52
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_00782
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_55 | HRGMv2_2055_55_8 | 5905 | 9447 | + | GH2 |
| sulfatase | HRGMv2_2055_55 | HRGMv2_2055_55_9 | 9541 | 10236 | + | S1_16 |
| TC | HRGMv2_2055_55 | HRGMv2_2055_55_10 | 10574 | 11551 | + | 3.A.1.1.10 |
| TC | HRGMv2_2055_55 | HRGMv2_2055_55_11 | 11565 | 12473 | + | 3.A.1.1.29 |
| STP | HRGMv2_2055_55 | HRGMv2_2055_55_12 | 12604 | 14196 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2055_55 | HRGMv2_2055_55_13 | 14398 | 17082 | + | PL26 |
| STP | HRGMv2_2055_55 | HRGMv2_2055_55_14 | 17098 | 17682 | + | Nitroreductase | Nitroreductase |
| CAZyme | HRGMv2_2055_55 | HRGMv2_2055_55_15 | 17714 | 18508 | + | CE12 |
| CAZyme | HRGMv2_2055_55 | HRGMv2_2055_55_16 | 18573 | 21026 | + | PL11 | PL11_1 |
| pfam | HRGMv2_2055_55 | HRGMv2_2055_55_17 | 21108 | 21761 | - | Cupin_2 |
| NULL(UNKNOWN) | HRGMv2_2055_55 | HRGMv2_2055_55_18 | 21849 | 22007 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2055_55 | HRGMv2_2055_55_19 | 22004 | 22312 | - | 3.A.1.14.11 |
Gene ID: HRGMv2_2055_55_8
Type: CAZyme
Location: 5905 - 9447 (+)
Type: CAZyme
Location: 5905 - 9447 (+)
Gene ID: HRGMv2_2055_55_9
Type: sulfatase
Location: 9541 - 10236 (+)
Type: sulfatase
Location: 9541 - 10236 (+)
Gene ID: HRGMv2_2055_55_10
Type: TC
Location: 10574 - 11551 (+)
Type: TC
Location: 10574 - 11551 (+)
Gene ID: HRGMv2_2055_55_11
Type: TC
Location: 11565 - 12473 (+)
Type: TC
Location: 11565 - 12473 (+)
Gene ID: HRGMv2_2055_55_12
Type: STP
Location: 12604 - 14196 (+)
Type: STP
Location: 12604 - 14196 (+)
Gene ID: HRGMv2_2055_55_13
Type: CAZyme
Location: 14398 - 17082 (+)
Type: CAZyme
Location: 14398 - 17082 (+)
Gene ID: HRGMv2_2055_55_14
Type: STP
Location: 17098 - 17682 (+)
Type: STP
Location: 17098 - 17682 (+)
Gene ID: HRGMv2_2055_55_15
Type: CAZyme
Location: 17714 - 18508 (+)
Type: CAZyme
Location: 17714 - 18508 (+)
Gene ID: HRGMv2_2055_55_16
Type: CAZyme
Location: 18573 - 21026 (+)
Type: CAZyme
Location: 18573 - 21026 (+)
Gene ID: HRGMv2_2055_55_17
Type: pfam
Location: 21108 - 21761 (-)
Type: pfam
Location: 21108 - 21761 (-)
Gene ID: HRGMv2_2055_55_18
Type:
Location: 21849 - 22007 (-)
Type:
Location: 21849 - 22007 (-)
Gene ID: HRGMv2_2055_55_19
Type: TC
Location: 22004 - 22312 (-)
Type: TC
Location: 22004 - 22312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.