Cluster: HRGMv2_2055_CGC49
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_50 | HRGMv2_2055_50_64 | 79432 | 81462 | - | GH127 |
| pfam | HRGMv2_2055_50 | HRGMv2_2055_50_65 | 81495 | 82988 | - | PGA_cap |
| CAZyme | HRGMv2_2055_50 | HRGMv2_2055_50_66 | 83023 | 83931 | - | GH43_22 |
| TC | HRGMv2_2055_50 | HRGMv2_2055_50_67 | 84156 | 85121 | + | 9.B.146.1.3 |
| CAZyme | HRGMv2_2055_50 | HRGMv2_2055_50_68 | 85238 | 88198 | + | GH2 |
Gene ID: HRGMv2_2055_50_64
Type: CAZyme
Location: 79432 - 81462 (-)
Type: CAZyme
Location: 79432 - 81462 (-)
Gene ID: HRGMv2_2055_50_65
Type: pfam
Location: 81495 - 82988 (-)
Type: pfam
Location: 81495 - 82988 (-)
Gene ID: HRGMv2_2055_50_66
Type: CAZyme
Location: 83023 - 83931 (-)
Type: CAZyme
Location: 83023 - 83931 (-)
Gene ID: HRGMv2_2055_50_67
Type: TC
Location: 84156 - 85121 (+)
Type: TC
Location: 84156 - 85121 (+)
Gene ID: HRGMv2_2055_50_68
Type: CAZyme
Location: 85238 - 88198 (+)
Type: CAZyme
Location: 85238 - 88198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_50_64 | vegan > omnivore | 1.07421 | 0.00701 |
| HRGMv2_2055_50_64 | vegetarian > omnivore | 1.39885 | 0.00683 |