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Cluster: HRGMv2_2055_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_50 HRGMv2_2055_50_50 61661 62479 - 9.B.28.1.8
NULL(UNKNOWN) HRGMv2_2055_50 HRGMv2_2055_50_51 62723 63493 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2055_50 HRGMv2_2055_50_52 63541 64668 - DHHW
TC HRGMv2_2055_50 HRGMv2_2055_50_53 64685 66085 - 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_2055_50 HRGMv2_2055_50_54 66102 66806 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2055_50 HRGMv2_2055_50_55 66951 69410 - GT35
Gene ID: HRGMv2_2055_50_50
Type: TC
Location: 61661 - 62479 (-)
Gene ID: HRGMv2_2055_50_51
Type:
Location: 62723 - 63493 (+)
Gene ID: HRGMv2_2055_50_52
Type: pfam
Location: 63541 - 64668 (-)
Gene ID: HRGMv2_2055_50_53
Type: TC
Location: 64685 - 66085 (-)
Gene ID: HRGMv2_2055_50_54
Type:
Location: 66102 - 66806 (-)
Gene ID: HRGMv2_2055_50_55
Type: CAZyme
Location: 66951 - 69410 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2055_50_50 vegan > omnivore 1.15529 0.00701
HRGMv2_2055_50_50 vegetarian > omnivore 1.32975 0.01089
HRGMv2_2055_50_52 vegan > omnivore 1.20633 0.00701
HRGMv2_2055_50_52 vegetarian > omnivore 1.38162 0.01089

🧭 Explore Read Mapping of CGC

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