Cluster: HRGMv2_2055_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_00942
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2055_50 | HRGMv2_2055_50_26 | 32268 | 34109 | - | 3.A.1.111.2 |
| TC | HRGMv2_2055_50 | HRGMv2_2055_50_27 | 34106 | 36004 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_2055_50 | HRGMv2_2055_50_28 | 35997 | 36992 | - | GT2 |
| CAZyme | HRGMv2_2055_50 | HRGMv2_2055_50_29 | 36992 | 37864 | - | GT2 |
Gene ID: HRGMv2_2055_50_26
Type: TC
Location: 32268 - 34109 (-)
Type: TC
Location: 32268 - 34109 (-)
Gene ID: HRGMv2_2055_50_27
Type: TC
Location: 34106 - 36004 (-)
Type: TC
Location: 34106 - 36004 (-)
Gene ID: HRGMv2_2055_50_28
Type: CAZyme
Location: 35997 - 36992 (-)
Type: CAZyme
Location: 35997 - 36992 (-)
Gene ID: HRGMv2_2055_50_29
Type: CAZyme
Location: 36992 - 37864 (-)
Type: CAZyme
Location: 36992 - 37864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_50_26 | vegan > omnivore | 1.31171 | 0.00701 |
| HRGMv2_2055_50_28 | vegan > omnivore | 1.47906 | 0.00701 |