Cluster: HRGMv2_2055_CGC44
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_00448
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_49 | HRGMv2_2055_49_4 | 7226 | 8584 | + | GH28 |
| NULL(UNKNOWN) | HRGMv2_2055_49 | HRGMv2_2055_49_5 | 8649 | 10256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2055_49 | HRGMv2_2055_49_6 | 10320 | 13619 | + | GH38 |
| TC | HRGMv2_2055_49 | HRGMv2_2055_49_7 | 13818 | 14756 | + | 3.A.1.1.10 |
| TC | HRGMv2_2055_49 | HRGMv2_2055_49_8 | 14756 | 15622 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_2055_49_4
Type: CAZyme
Location: 7226 - 8584 (+)
Type: CAZyme
Location: 7226 - 8584 (+)
Gene ID: HRGMv2_2055_49_5
Type:
Location: 8649 - 10256 (+)
Type:
Location: 8649 - 10256 (+)
Gene ID: HRGMv2_2055_49_6
Type: CAZyme
Location: 10320 - 13619 (+)
Type: CAZyme
Location: 10320 - 13619 (+)
Gene ID: HRGMv2_2055_49_7
Type: TC
Location: 13818 - 14756 (+)
Type: TC
Location: 13818 - 14756 (+)
Gene ID: HRGMv2_2055_49_8
Type: TC
Location: 14756 - 15622 (+)
Type: TC
Location: 14756 - 15622 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_49_4 | vegan > omnivore | 1.34961 | 0.00701 |
| HRGMv2_2055_49_5 | vegetarian > omnivore | 1.18122 | 0.01089 |