Cluster: HRGMv2_2055_CGC39
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_09412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_38 | HRGMv2_2055_38_21 | 19842 | 21197 | - | GH43_35 |
| TC | HRGMv2_2055_38 | HRGMv2_2055_38_22 | 21332 | 22267 | + | 2.A.7.3.52 |
| pfam | HRGMv2_2055_38 | HRGMv2_2055_38_23 | 22281 | 23168 | + | PseudoU_synth_2 |
| pfam | HRGMv2_2055_38 | HRGMv2_2055_38_24 | 23210 | 25486 | - | FtsX | FtsX |
| TC | HRGMv2_2055_38 | HRGMv2_2055_38_25 | 25480 | 26178 | - | 3.A.1.134.3 |
| peptidase | HRGMv2_2055_38 | HRGMv2_2055_38_26 | 26384 | 27523 | - | M24.UPB |
| NULL(UNKNOWN) | HRGMv2_2055_38 | HRGMv2_2055_38_27 | 27549 | 29303 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2055_38 | HRGMv2_2055_38_28 | 29449 | 30807 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2055_38 | HRGMv2_2055_38_29 | 30947 | 32029 | - | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2055_38 | HRGMv2_2055_38_30 | 32177 | 33283 | - | 3.A.1.1.26 |
| TC | HRGMv2_2055_38 | HRGMv2_2055_38_31 | 33458 | 34336 | - | 2.A.115.1.1 |
Gene ID: HRGMv2_2055_38_21
Type: CAZyme
Location: 19842 - 21197 (-)
Type: CAZyme
Location: 19842 - 21197 (-)
Gene ID: HRGMv2_2055_38_22
Type: TC
Location: 21332 - 22267 (+)
Type: TC
Location: 21332 - 22267 (+)
Gene ID: HRGMv2_2055_38_23
Type: pfam
Location: 22281 - 23168 (+)
Type: pfam
Location: 22281 - 23168 (+)
Gene ID: HRGMv2_2055_38_24
Type: pfam
Location: 23210 - 25486 (-)
Type: pfam
Location: 23210 - 25486 (-)
Gene ID: HRGMv2_2055_38_25
Type: TC
Location: 25480 - 26178 (-)
Type: TC
Location: 25480 - 26178 (-)
Gene ID: HRGMv2_2055_38_26
Type: peptidase
Location: 26384 - 27523 (-)
Type: peptidase
Location: 26384 - 27523 (-)
Gene ID: HRGMv2_2055_38_27
Type:
Location: 27549 - 29303 (-)
Type:
Location: 27549 - 29303 (-)
Gene ID: HRGMv2_2055_38_28
Type: TC
Location: 29449 - 30807 (-)
Type: TC
Location: 29449 - 30807 (-)
Gene ID: HRGMv2_2055_38_29
Type: pfam
Location: 30947 - 32029 (-)
Type: pfam
Location: 30947 - 32029 (-)
Gene ID: HRGMv2_2055_38_30
Type: TC
Location: 32177 - 33283 (-)
Type: TC
Location: 32177 - 33283 (-)
Gene ID: HRGMv2_2055_38_31
Type: TC
Location: 33458 - 34336 (-)
Type: TC
Location: 33458 - 34336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_38_25 | vegan > omnivore | 1.09802 | 0.00701 |
| HRGMv2_2055_38_26 | vegetarian > omnivore | 1.05366 | 0.01089 |