Cluster: HRGMv2_2055_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_30 | HRGMv2_2055_30_11 | 14134 | 15639 | + | GH51_1 |
| CAZyme | HRGMv2_2055_30 | HRGMv2_2055_30_12 | 15661 | 16644 | + | GH43_26 |
| pfam | HRGMv2_2055_30 | HRGMv2_2055_30_13 | 16697 | 18196 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| STP | HRGMv2_2055_30 | HRGMv2_2055_30_14 | 18431 | 18775 | + | Sigma70_r4_2 |
| TC | HRGMv2_2055_30 | HRGMv2_2055_30_15 | 18809 | 20161 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_2055_30_11
Type: CAZyme
Location: 14134 - 15639 (+)
Type: CAZyme
Location: 14134 - 15639 (+)
Gene ID: HRGMv2_2055_30_12
Type: CAZyme
Location: 15661 - 16644 (+)
Type: CAZyme
Location: 15661 - 16644 (+)
Gene ID: HRGMv2_2055_30_13
Type: pfam
Location: 16697 - 18196 (+)
Type: pfam
Location: 16697 - 18196 (+)
Gene ID: HRGMv2_2055_30_14
Type: STP
Location: 18431 - 18775 (+)
Type: STP
Location: 18431 - 18775 (+)
Gene ID: HRGMv2_2055_30_15
Type: TC
Location: 18809 - 20161 (+)
Type: TC
Location: 18809 - 20161 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.