Cluster: HRGMv2_2055_CGC31
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2055_28 | HRGMv2_2055_28_42 | 48106 | 50100 | - | GH120 |
| STP | HRGMv2_2055_28 | HRGMv2_2055_28_43 | 50325 | 51932 | - | SBP_bac_1 |
| TC | HRGMv2_2055_28 | HRGMv2_2055_28_44 | 52046 | 53788 | + | 9.B.33.1.1 |
| TF | HRGMv2_2055_28 | HRGMv2_2055_28_45 | 53839 | 55482 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_2055_28 | HRGMv2_2055_28_46 | 55494 | 56102 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2055_28 | HRGMv2_2055_28_47 | 56114 | 58903 | - | GH38 |
| STP | HRGMv2_2055_28 | HRGMv2_2055_28_48 | 59022 | 60503 | - | SBP_bac_1 |
| STP | HRGMv2_2055_28 | HRGMv2_2055_28_49 | 60533 | 62026 | - | SBP_bac_1 |
| TC | HRGMv2_2055_28 | HRGMv2_2055_28_50 | 62121 | 63014 | - | 3.A.1.1.29 |
| TC | HRGMv2_2055_28 | HRGMv2_2055_28_51 | 63045 | 63995 | - | 3.A.1.1.9 |
| TF | HRGMv2_2055_28 | HRGMv2_2055_28_52 | 64546 | 65727 | + | GntR |
| CAZyme | HRGMv2_2055_28 | HRGMv2_2055_28_53 | 65829 | 68957 | + | GH38 |
| pfam | HRGMv2_2055_28 | HRGMv2_2055_28_54 | 69029 | 71344 | + | Hepar_II_III_C |
| CAZyme | HRGMv2_2055_28 | HRGMv2_2055_28_55 | 71427 | 72848 | + | GH30_1 |
Gene ID: HRGMv2_2055_28_42
Type: CAZyme
Location: 48106 - 50100 (-)
Type: CAZyme
Location: 48106 - 50100 (-)
Gene ID: HRGMv2_2055_28_43
Type: STP
Location: 50325 - 51932 (-)
Type: STP
Location: 50325 - 51932 (-)
Gene ID: HRGMv2_2055_28_44
Type: TC
Location: 52046 - 53788 (+)
Type: TC
Location: 52046 - 53788 (+)
Gene ID: HRGMv2_2055_28_45
Type: TF
Location: 53839 - 55482 (+)
Type: TF
Location: 53839 - 55482 (+)
Gene ID: HRGMv2_2055_28_46
Type:
Location: 55494 - 56102 (-)
Type:
Location: 55494 - 56102 (-)
Gene ID: HRGMv2_2055_28_47
Type: CAZyme
Location: 56114 - 58903 (-)
Type: CAZyme
Location: 56114 - 58903 (-)
Gene ID: HRGMv2_2055_28_48
Type: STP
Location: 59022 - 60503 (-)
Type: STP
Location: 59022 - 60503 (-)
Gene ID: HRGMv2_2055_28_49
Type: STP
Location: 60533 - 62026 (-)
Type: STP
Location: 60533 - 62026 (-)
Gene ID: HRGMv2_2055_28_50
Type: TC
Location: 62121 - 63014 (-)
Type: TC
Location: 62121 - 63014 (-)
Gene ID: HRGMv2_2055_28_51
Type: TC
Location: 63045 - 63995 (-)
Type: TC
Location: 63045 - 63995 (-)
Gene ID: HRGMv2_2055_28_52
Type: TF
Location: 64546 - 65727 (+)
Type: TF
Location: 64546 - 65727 (+)
Gene ID: HRGMv2_2055_28_53
Type: CAZyme
Location: 65829 - 68957 (+)
Type: CAZyme
Location: 65829 - 68957 (+)
Gene ID: HRGMv2_2055_28_54
Type: pfam
Location: 69029 - 71344 (+)
Type: pfam
Location: 69029 - 71344 (+)
Gene ID: HRGMv2_2055_28_55
Type: CAZyme
Location: 71427 - 72848 (+)
Type: CAZyme
Location: 71427 - 72848 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.