Cluster: HRGMv2_2055_CGC30

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2055_28	HRGMv2_2055_28_31	33772	33999	-	3.D.1.6.3
pfam	HRGMv2_2055_28	HRGMv2_2055_28_32	34064	35050	-	ACP_syn_III_C \| ACP_syn_III
CAZyme	HRGMv2_2055_28	HRGMv2_2055_28_33	35324	36622	+	GT2
TC	HRGMv2_2055_28	HRGMv2_2055_28_34	36682	39927	-	9.B.74.1.4

Gene ID: HRGMv2_2055_28_31
Type: TC
Location: 33772 - 33999 (-)

Gene ID: HRGMv2_2055_28_32
Type: pfam
Location: 34064 - 35050 (-)

Gene ID: HRGMv2_2055_28_33
Type: CAZyme
Location: 35324 - 36622 (+)

Gene ID: HRGMv2_2055_28_34
Type: TC
Location: 36682 - 39927 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2055_28_31	vegan > omnivore	1.75075	0.00701
HRGMv2_2055_28_31	vegetarian > omnivore	1.26428	0.01089
HRGMv2_2055_28_32	vegan > omnivore	1.11552	0.00701
HRGMv2_2055_28_33	vegan > omnivore	1.11429	0.00701