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Cluster: HRGMv2_2055_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2055_27 HRGMv2_2055_27_2 1141 3381 + GH2
pfam HRGMv2_2055_27 HRGMv2_2055_27_3 3639 4490 + Lactamase_B_2 | Lactamase_B_3
CAZyme HRGMv2_2055_27 HRGMv2_2055_27_4 4510 6207 + GH123
pfam HRGMv2_2055_27 HRGMv2_2055_27_5 6265 7629 + MatE | MatE | MurJ
TC HRGMv2_2055_27 HRGMv2_2055_27_6 7683 9011 + 2.A.35.1.5
pfam HRGMv2_2055_27 HRGMv2_2055_27_7 9031 9618 + DUF218
CAZyme HRGMv2_2055_27 HRGMv2_2055_27_8 9666 11567 - GH146
Gene ID: HRGMv2_2055_27_2
Type: CAZyme
Location: 1141 - 3381 (+)
Gene ID: HRGMv2_2055_27_3
Type: pfam
Location: 3639 - 4490 (+)
Gene ID: HRGMv2_2055_27_4
Type: CAZyme
Location: 4510 - 6207 (+)
Gene ID: HRGMv2_2055_27_5
Type: pfam
Location: 6265 - 7629 (+)
Gene ID: HRGMv2_2055_27_6
Type: TC
Location: 7683 - 9011 (+)
Gene ID: HRGMv2_2055_27_7
Type: pfam
Location: 9031 - 9618 (+)
Gene ID: HRGMv2_2055_27_8
Type: CAZyme
Location: 9666 - 11567 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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