Cluster: HRGMv2_2055_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- CGC Family ID: CGCFAM_09378
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2055_22 | HRGMv2_2055_22_67 | 78954 | 79592 | + | 3.A.1.124.1 |
| TF | HRGMv2_2055_22 | HRGMv2_2055_22_68 | 79720 | 80487 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2055_22 | HRGMv2_2055_22_69 | 80728 | 82047 | + | GH4 |
| peptidase | HRGMv2_2055_22 | HRGMv2_2055_22_70 | 82201 | 83247 | - | M42.UNW |
| TC | HRGMv2_2055_22 | HRGMv2_2055_22_71 | 83635 | 84576 | + | 3.A.1.1.10 |
| TC | HRGMv2_2055_22 | HRGMv2_2055_22_72 | 84597 | 85517 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_2055_22_67
Type: TC
Location: 78954 - 79592 (+)
Type: TC
Location: 78954 - 79592 (+)
Gene ID: HRGMv2_2055_22_68
Type: TF
Location: 79720 - 80487 (-)
Type: TF
Location: 79720 - 80487 (-)
Gene ID: HRGMv2_2055_22_69
Type: CAZyme
Location: 80728 - 82047 (+)
Type: CAZyme
Location: 80728 - 82047 (+)
Gene ID: HRGMv2_2055_22_70
Type: peptidase
Location: 82201 - 83247 (-)
Type: peptidase
Location: 82201 - 83247 (-)
Gene ID: HRGMv2_2055_22_71
Type: TC
Location: 83635 - 84576 (+)
Type: TC
Location: 83635 - 84576 (+)
Gene ID: HRGMv2_2055_22_72
Type: TC
Location: 84597 - 85517 (+)
Type: TC
Location: 84597 - 85517 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_22_67 | vegetarian > omnivore | 1.26460 | 0.01089 |