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Cluster: HRGMv2_2055_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_20 HRGMv2_2055_20_14 10971 11816 + 3.A.1.8.1
TC HRGMv2_2055_20 HRGMv2_2055_20_15 11911 12603 + 3.A.1.8.1
TC HRGMv2_2055_20 HRGMv2_2055_20_16 12625 13701 + 3.A.1.10.3
pfam HRGMv2_2055_20 HRGMv2_2055_20_17 13726 14562 + SpoU_methylase
NULL(UNKNOWN) HRGMv2_2055_20 HRGMv2_2055_20_18 14540 15238 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2055_20 HRGMv2_2055_20_19 15460 16095 - 2.A.88.6.1
pfam HRGMv2_2055_20 HRGMv2_2055_20_20 16169 17170 - IU_nuc_hydro
TF HRGMv2_2055_20 HRGMv2_2055_20_21 17346 18215 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2055_20 HRGMv2_2055_20_22 18315 19631 + GH27
Gene ID: HRGMv2_2055_20_14
Type: TC
Location: 10971 - 11816 (+)
Gene ID: HRGMv2_2055_20_15
Type: TC
Location: 11911 - 12603 (+)
Gene ID: HRGMv2_2055_20_16
Type: TC
Location: 12625 - 13701 (+)
Gene ID: HRGMv2_2055_20_17
Type: pfam
Location: 13726 - 14562 (+)
Gene ID: HRGMv2_2055_20_18
Type:
Location: 14540 - 15238 (-)
Gene ID: HRGMv2_2055_20_19
Type: TC
Location: 15460 - 16095 (-)
Gene ID: HRGMv2_2055_20_20
Type: pfam
Location: 16169 - 17170 (-)
Gene ID: HRGMv2_2055_20_21
Type: TF
Location: 17346 - 18215 (-)
Gene ID: HRGMv2_2055_20_22
Type: CAZyme
Location: 18315 - 19631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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