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Cluster: HRGMv2_2055_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_16 HRGMv2_2055_16_2 916 2685 - 3.A.1.112.9
pfam HRGMv2_2055_16 HRGMv2_2055_16_3 2682 4016 - PqqD
CAZyme HRGMv2_2055_16 HRGMv2_2055_16_4 4054 5136 - GT2
NULL(UNKNOWN) HRGMv2_2055_16 HRGMv2_2055_16_5 5313 5792 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2055_16 HRGMv2_2055_16_6 5724 7235 - 2.A.66.1.40
CAZyme HRGMv2_2055_16 HRGMv2_2055_16_7 7266 8084 - GT2
CAZyme HRGMv2_2055_16 HRGMv2_2055_16_8 8098 9306 - GT4
pfam HRGMv2_2055_16 HRGMv2_2055_16_9 9321 9704 - DUF2304
pfam HRGMv2_2055_16 HRGMv2_2055_16_10 9767 11236 - PelG
CAZyme HRGMv2_2055_16 HRGMv2_2055_16_11 11256 12716 - GT4
Gene ID: HRGMv2_2055_16_2
Type: TC
Location: 916 - 2685 (-)
Gene ID: HRGMv2_2055_16_3
Type: pfam
Location: 2682 - 4016 (-)
Gene ID: HRGMv2_2055_16_4
Type: CAZyme
Location: 4054 - 5136 (-)
Gene ID: HRGMv2_2055_16_5
Type:
Location: 5313 - 5792 (+)
Gene ID: HRGMv2_2055_16_6
Type: TC
Location: 5724 - 7235 (-)
Gene ID: HRGMv2_2055_16_7
Type: CAZyme
Location: 7266 - 8084 (-)
Gene ID: HRGMv2_2055_16_8
Type: CAZyme
Location: 8098 - 9306 (-)
Gene ID: HRGMv2_2055_16_9
Type: pfam
Location: 9321 - 9704 (-)
Gene ID: HRGMv2_2055_16_10
Type: pfam
Location: 9767 - 11236 (-)
Gene ID: HRGMv2_2055_16_11
Type: CAZyme
Location: 11256 - 12716 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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