Cluster: HRGMv2_2055_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2055_1 | HRGMv2_2055_1_7 | 6677 | 7630 | - | 9.B.34.1.1 |
| NULL(UNKNOWN) | HRGMv2_2055_1 | HRGMv2_2055_1_8 | 7688 | 8023 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2055_1 | HRGMv2_2055_1_9 | 8351 | 10234 | - | GH129 |
| pfam | HRGMv2_2055_1 | HRGMv2_2055_1_10 | 10339 | 11133 | - | F420_oxidored | P5CR_dimer |
| pfam | HRGMv2_2055_1 | HRGMv2_2055_1_11 | 11177 | 11362 | - | Fer4_12 |
| TC | HRGMv2_2055_1 | HRGMv2_2055_1_12 | 11438 | 12787 | - | 2.A.66.1.28 |
Gene ID: HRGMv2_2055_1_7
Type: TC
Location: 6677 - 7630 (-)
Type: TC
Location: 6677 - 7630 (-)
Gene ID: HRGMv2_2055_1_8
Type:
Location: 7688 - 8023 (-)
Type:
Location: 7688 - 8023 (-)
Gene ID: HRGMv2_2055_1_9
Type: CAZyme
Location: 8351 - 10234 (-)
Type: CAZyme
Location: 8351 - 10234 (-)
Gene ID: HRGMv2_2055_1_10
Type: pfam
Location: 10339 - 11133 (-)
Type: pfam
Location: 10339 - 11133 (-)
Gene ID: HRGMv2_2055_1_11
Type: pfam
Location: 11177 - 11362 (-)
Type: pfam
Location: 11177 - 11362 (-)
Gene ID: HRGMv2_2055_1_12
Type: TC
Location: 11438 - 12787 (-)
Type: TC
Location: 11438 - 12787 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_1_7 | vegan > omnivore | 1.58203 | 0.00701 |
| HRGMv2_2055_1_7 | vegetarian > omnivore | 1.21848 | 0.01089 |
| HRGMv2_2055_1_8 | vegan > omnivore | 1.89076 | 0.00701 |
| HRGMv2_2055_1_8 | vegetarian > omnivore | 2.40870 | 0.01089 |
| HRGMv2_2055_1_9 | vegan > omnivore | 1.17772 | 0.00701 |
| HRGMv2_2055_1_9 | vegetarian > omnivore | 1.27432 | 0.01004 |
| HRGMv2_2055_1_12 | vegan > omnivore | 1.16706 | 0.00701 |
| HRGMv2_2055_1_12 | vegetarian > omnivore | 1.09964 | 0.01089 |