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Cluster: HRGMv2_2055_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_12 HRGMv2_2055_12_32 39749 42340 + 3.A.3.5.15
STP HRGMv2_2055_12 HRGMv2_2055_12_33 42639 44090 + SBP_bac_1
TC HRGMv2_2055_12 HRGMv2_2055_12_34 44193 45119 + 3.A.1.1.10
TC HRGMv2_2055_12 HRGMv2_2055_12_35 45137 46024 + 3.A.1.1.29
CAZyme HRGMv2_2055_12 HRGMv2_2055_12_36 46058 47683 + GH5_46
Gene ID: HRGMv2_2055_12_32
Type: TC
Location: 39749 - 42340 (+)
Gene ID: HRGMv2_2055_12_33
Type: STP
Location: 42639 - 44090 (+)
Gene ID: HRGMv2_2055_12_34
Type: TC
Location: 44193 - 45119 (+)
Gene ID: HRGMv2_2055_12_35
Type: TC
Location: 45137 - 46024 (+)
Gene ID: HRGMv2_2055_12_36
Type: CAZyme
Location: 46058 - 47683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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