dbCAN HGM

Cluster: HRGMv2_2055_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2055_12	HRGMv2_2055_12_1	165	3713	+	GH115
TF	HRGMv2_2055_12	HRGMv2_2055_12_2	3783	4187	-	Rrf2
TC	HRGMv2_2055_12	HRGMv2_2055_12_3	4429	5931	+	3.A.1.5.39
TC	HRGMv2_2055_12	HRGMv2_2055_12_4	5994	6935	+	3.A.1.5.32
TC	HRGMv2_2055_12	HRGMv2_2055_12_5	7049	7855	+	3.A.1.5.27
TC	HRGMv2_2055_12	HRGMv2_2055_12_6	7855	8853	+	3.A.1.5.20
TC	HRGMv2_2055_12	HRGMv2_2055_12_7	8846	9808	+	3.A.1.5.20
TC	HRGMv2_2055_12	HRGMv2_2055_12_8	9881	11236	-	2.A.66.1.25
peptidase	HRGMv2_2055_12	HRGMv2_2055_12_9	11338	12966	-	S12.UPW
STP	HRGMv2_2055_12	HRGMv2_2055_12_10	13203	14693	+	SBP_bac_1
TC	HRGMv2_2055_12	HRGMv2_2055_12_11	14930	15901	+	3.A.1.1.29
TC	HRGMv2_2055_12	HRGMv2_2055_12_12	15917	16759	+	3.A.1.1.29
TC	HRGMv2_2055_12	HRGMv2_2055_12_13	16855	18219	+	2.A.66.1.26

Gene ID: HRGMv2_2055_12_1
Type: CAZyme
Location: 165 - 3713 (+)

Gene ID: HRGMv2_2055_12_2
Type: TF
Location: 3783 - 4187 (-)

Gene ID: HRGMv2_2055_12_3
Type: TC
Location: 4429 - 5931 (+)

Gene ID: HRGMv2_2055_12_4
Type: TC
Location: 5994 - 6935 (+)

Gene ID: HRGMv2_2055_12_5
Type: TC
Location: 7049 - 7855 (+)

Gene ID: HRGMv2_2055_12_6
Type: TC
Location: 7855 - 8853 (+)

Gene ID: HRGMv2_2055_12_7
Type: TC
Location: 8846 - 9808 (+)

Gene ID: HRGMv2_2055_12_8
Type: TC
Location: 9881 - 11236 (-)

Gene ID: HRGMv2_2055_12_9
Type: peptidase
Location: 11338 - 12966 (-)

Gene ID: HRGMv2_2055_12_10
Type: STP
Location: 13203 - 14693 (+)

Gene ID: HRGMv2_2055_12_11
Type: TC
Location: 14930 - 15901 (+)

Gene ID: HRGMv2_2055_12_12
Type: TC
Location: 15917 - 16759 (+)

Gene ID: HRGMv2_2055_12_13
Type: TC
Location: 16855 - 18219 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2055_12_7	vegetarian > vegan	1.30930	0.00799
HRGMv2_2055_12_9	vegan > omnivore	1.14943	0.00701
HRGMv2_2055_12_9	vegetarian > omnivore	1.72627	0.01004
HRGMv2_2055_12_10	vegetarian > omnivore	1.10040	0.01089