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Cluster: HRGMv2_2055_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2055_11 HRGMv2_2055_11_17 18940 20340 - 2.A.40.1.4
TC HRGMv2_2055_11 HRGMv2_2055_11_18 20400 22373 - 3.A.1.121.4
CAZyme HRGMv2_2055_11 HRGMv2_2055_11_19 22407 24815 - GH51_2
NULL(UNKNOWN) HRGMv2_2055_11 HRGMv2_2055_11_20 24974 25261 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2055_11 HRGMv2_2055_11_21 25445 28549 - LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5
TC HRGMv2_2055_11 HRGMv2_2055_11_22 28698 30539 - 3.A.1.135.6
TC HRGMv2_2055_11 HRGMv2_2055_11_23 30539 32296 - 3.A.1.135.6
pfam HRGMv2_2055_11 HRGMv2_2055_11_24 32595 33239 - PhoU | PhoU
TC HRGMv2_2055_11 HRGMv2_2055_11_25 33266 34021 - 3.A.1.7.5
TC HRGMv2_2055_11 HRGMv2_2055_11_26 34018 34950 - 3.A.1.7.2
TC HRGMv2_2055_11 HRGMv2_2055_11_27 34980 35846 - 3.A.1.7.1
Gene ID: HRGMv2_2055_11_17
Type: TC
Location: 18940 - 20340 (-)
Gene ID: HRGMv2_2055_11_18
Type: TC
Location: 20400 - 22373 (-)
Gene ID: HRGMv2_2055_11_19
Type: CAZyme
Location: 22407 - 24815 (-)
Gene ID: HRGMv2_2055_11_20
Type:
Location: 24974 - 25261 (-)
Gene ID: HRGMv2_2055_11_21
Type: pfam
Location: 25445 - 28549 (-)
Gene ID: HRGMv2_2055_11_22
Type: TC
Location: 28698 - 30539 (-)
Gene ID: HRGMv2_2055_11_23
Type: TC
Location: 30539 - 32296 (-)
Gene ID: HRGMv2_2055_11_24
Type: pfam
Location: 32595 - 33239 (-)
Gene ID: HRGMv2_2055_11_25
Type: TC
Location: 33266 - 34021 (-)
Gene ID: HRGMv2_2055_11_26
Type: TC
Location: 34018 - 34950 (-)
Gene ID: HRGMv2_2055_11_27
Type: TC
Location: 34980 - 35846 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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