Cluster: HRGMv2_2055_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2055_9 | HRGMv2_2055_9_91 | 109667 | 112651 | + | 9.B.144.1.5 |
| pfam | HRGMv2_2055_9 | HRGMv2_2055_9_92 | 112675 | 114051 | + | Lyase_1 | ASL_C2 |
| pfam | HRGMv2_2055_9 | HRGMv2_2055_9_93 | 114165 | 115922 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_SAD |
| TC | HRGMv2_2055_9 | HRGMv2_2055_9_94 | 116301 | 117701 | - | 8.A.3.2.3 |
| pfam | HRGMv2_2055_9 | HRGMv2_2055_9_95 | 117811 | 117993 | - | DUF6472 |
| CAZyme | HRGMv2_2055_9 | HRGMv2_2055_9_96 | 118091 | 119221 | - | GH105 |
Gene ID: HRGMv2_2055_9_91
Type: TC
Location: 109667 - 112651 (+)
Type: TC
Location: 109667 - 112651 (+)
Gene ID: HRGMv2_2055_9_92
Type: pfam
Location: 112675 - 114051 (+)
Type: pfam
Location: 112675 - 114051 (+)
Gene ID: HRGMv2_2055_9_93
Type: pfam
Location: 114165 - 115922 (-)
Type: pfam
Location: 114165 - 115922 (-)
Gene ID: HRGMv2_2055_9_94
Type: TC
Location: 116301 - 117701 (-)
Type: TC
Location: 116301 - 117701 (-)
Gene ID: HRGMv2_2055_9_95
Type: pfam
Location: 117811 - 117993 (-)
Type: pfam
Location: 117811 - 117993 (-)
Gene ID: HRGMv2_2055_9_96
Type: CAZyme
Location: 118091 - 119221 (-)
Type: CAZyme
Location: 118091 - 119221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anthropogastromicrobium
Species
Anthropogastromicrobium aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2055_9_95 | vegan > omnivore | 2.11672 | 0.00701 |
| HRGMv2_2055_9_95 | vegetarian > omnivore | 1.72933 | 0.01089 |