Cluster: HRGMv2_2054_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2054_5 | HRGMv2_2054_5_32 | 36171 | 42389 | + | CBM32 | GH84 |
| pfam | HRGMv2_2054_5 | HRGMv2_2054_5_33 | 42597 | 43685 | + | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2054_5 | HRGMv2_2054_5_34 | 43859 | 45124 | + | 9.B.174.1.1 |
| STP | HRGMv2_2054_5 | HRGMv2_2054_5_35 | 45114 | 45947 | + | Sigma70_r2 | Sigma70_r3 |
| pfam | HRGMv2_2054_5 | HRGMv2_2054_5_36 | 46161 | 46535 | + | DUF3792 |
| TC | HRGMv2_2054_5 | HRGMv2_2054_5_37 | 46642 | 48054 | + | 3.A.6.3.1 |
Gene ID: HRGMv2_2054_5_32
Type: CAZyme
Location: 36171 - 42389 (+)
Type: CAZyme
Location: 36171 - 42389 (+)
Gene ID: HRGMv2_2054_5_33
Type: pfam
Location: 42597 - 43685 (+)
Type: pfam
Location: 42597 - 43685 (+)
Gene ID: HRGMv2_2054_5_34
Type: TC
Location: 43859 - 45124 (+)
Type: TC
Location: 43859 - 45124 (+)
Gene ID: HRGMv2_2054_5_35
Type: STP
Location: 45114 - 45947 (+)
Type: STP
Location: 45114 - 45947 (+)
Gene ID: HRGMv2_2054_5_36
Type: pfam
Location: 46161 - 46535 (+)
Type: pfam
Location: 46161 - 46535 (+)
Gene ID: HRGMv2_2054_5_37
Type: TC
Location: 46642 - 48054 (+)
Type: TC
Location: 46642 - 48054 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.