Cluster: HRGMv2_2054_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2054_4 | HRGMv2_2054_4_18 | 25086 | 27089 | - | 3.A.25.2.1 |
| pfam | HRGMv2_2054_4 | HRGMv2_2054_4_19 | 27300 | 28778 | + | DUF1846 | DUF1846_C |
| STP | HRGMv2_2054_4 | HRGMv2_2054_4_20 | 28924 | 30534 | + | CbiA |
| CAZyme | HRGMv2_2054_4 | HRGMv2_2054_4_21 | 30718 | 32016 | - | CE4 |
Gene ID: HRGMv2_2054_4_18
Type: TC
Location: 25086 - 27089 (-)
Type: TC
Location: 25086 - 27089 (-)
Gene ID: HRGMv2_2054_4_19
Type: pfam
Location: 27300 - 28778 (+)
Type: pfam
Location: 27300 - 28778 (+)
Gene ID: HRGMv2_2054_4_20
Type: STP
Location: 28924 - 30534 (+)
Type: STP
Location: 28924 - 30534 (+)
Gene ID: HRGMv2_2054_4_21
Type: CAZyme
Location: 30718 - 32016 (-)
Type: CAZyme
Location: 30718 - 32016 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.