Cluster: HRGMv2_2054_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2054_43 | HRGMv2_2054_43_11 | 13334 | 17449 | - | GH3 |
| TF | HRGMv2_2054_43 | HRGMv2_2054_43_12 | 17848 | 19356 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2054_43 | HRGMv2_2054_43_13 | 19334 | 21166 | + | 8.A.59.2.1 |
| TC | HRGMv2_2054_43 | HRGMv2_2054_43_14 | 21275 | 21778 | - | 4.A.1.2.6 |
| TC | HRGMv2_2054_43 | HRGMv2_2054_43_15 | 21865 | 22467 | - | 2.A.115.2.14 |
| TC | HRGMv2_2054_43 | HRGMv2_2054_43_16 | 22484 | 23842 | - | 2.A.45.2.2 |
Gene ID: HRGMv2_2054_43_11
Type: CAZyme
Location: 13334 - 17449 (-)
Type: CAZyme
Location: 13334 - 17449 (-)
Gene ID: HRGMv2_2054_43_12
Type: TF
Location: 17848 - 19356 (+)
Type: TF
Location: 17848 - 19356 (+)
Gene ID: HRGMv2_2054_43_13
Type: TC
Location: 19334 - 21166 (+)
Type: TC
Location: 19334 - 21166 (+)
Gene ID: HRGMv2_2054_43_14
Type: TC
Location: 21275 - 21778 (-)
Type: TC
Location: 21275 - 21778 (-)
Gene ID: HRGMv2_2054_43_15
Type: TC
Location: 21865 - 22467 (-)
Type: TC
Location: 21865 - 22467 (-)
Gene ID: HRGMv2_2054_43_16
Type: TC
Location: 22484 - 23842 (-)
Type: TC
Location: 22484 - 23842 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2054_43_14 | vegan > omnivore | 1.23798 | 0.03489 |