Cluster: HRGMv2_2054_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2054
- CGC Family ID: CGCFAM_07955
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2054_35 | HRGMv2_2054_35_6 | 9372 | 12785 | + | GH3 |
| CAZyme | HRGMv2_2054_35 | HRGMv2_2054_35_7 | 13334 | 17434 | + | GH3 |
| peptidase | HRGMv2_2054_35 | HRGMv2_2054_35_8 | 17711 | 19966 | + | S08.UPA |
| TC | HRGMv2_2054_35 | HRGMv2_2054_35_9 | 19988 | 22333 | + | 8.A.43.1.1 |
| TC | HRGMv2_2054_35 | HRGMv2_2054_35_10 | 22402 | 25656 | + | 8.A.43.1.2 |
Gene ID: HRGMv2_2054_35_6
Type: CAZyme
Location: 9372 - 12785 (+)
Type: CAZyme
Location: 9372 - 12785 (+)
Gene ID: HRGMv2_2054_35_7
Type: CAZyme
Location: 13334 - 17434 (+)
Type: CAZyme
Location: 13334 - 17434 (+)
Gene ID: HRGMv2_2054_35_8
Type: peptidase
Location: 17711 - 19966 (+)
Type: peptidase
Location: 17711 - 19966 (+)
Gene ID: HRGMv2_2054_35_9
Type: TC
Location: 19988 - 22333 (+)
Type: TC
Location: 19988 - 22333 (+)
Gene ID: HRGMv2_2054_35_10
Type: TC
Location: 22402 - 25656 (+)
Type: TC
Location: 22402 - 25656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.