Cluster: HRGMv2_2054_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2054_34 | HRGMv2_2054_34_13 | 13839 | 15269 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2054_34 | HRGMv2_2054_34_14 | 15283 | 16077 | + | GT2 |
| pfam | HRGMv2_2054_34 | HRGMv2_2054_34_15 | 16081 | 17250 | + | Glyphos_transf |
| pfam | HRGMv2_2054_34 | HRGMv2_2054_34_16 | 17252 | 18040 | + | ABC2_membrane |
| TC | HRGMv2_2054_34 | HRGMv2_2054_34_17 | 18040 | 18771 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_2054_34_13
Type: TC
Location: 13839 - 15269 (+)
Type: TC
Location: 13839 - 15269 (+)
Gene ID: HRGMv2_2054_34_14
Type: CAZyme
Location: 15283 - 16077 (+)
Type: CAZyme
Location: 15283 - 16077 (+)
Gene ID: HRGMv2_2054_34_15
Type: pfam
Location: 16081 - 17250 (+)
Type: pfam
Location: 16081 - 17250 (+)
Gene ID: HRGMv2_2054_34_16
Type: pfam
Location: 17252 - 18040 (+)
Type: pfam
Location: 17252 - 18040 (+)
Gene ID: HRGMv2_2054_34_17
Type: TC
Location: 18040 - 18771 (+)
Type: TC
Location: 18040 - 18771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.