Cluster: HRGMv2_2054_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2054
- CGC Family ID: CGCFAM_00650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2054_28 | HRGMv2_2054_28_7 | 6651 | 8123 | + | 4.A.1.1.7 |
| pfam | HRGMv2_2054_28 | HRGMv2_2054_28_8 | 8250 | 8918 | + | CBM9_2 |
| pfam | HRGMv2_2054_28 | HRGMv2_2054_28_9 | 8945 | 9688 | + | Glucosamine_iso |
| CAZyme | HRGMv2_2054_28 | HRGMv2_2054_28_10 | 9689 | 10792 | + | CE9 |
Gene ID: HRGMv2_2054_28_7
Type: TC
Location: 6651 - 8123 (+)
Type: TC
Location: 6651 - 8123 (+)
Gene ID: HRGMv2_2054_28_8
Type: pfam
Location: 8250 - 8918 (+)
Type: pfam
Location: 8250 - 8918 (+)
Gene ID: HRGMv2_2054_28_9
Type: pfam
Location: 8945 - 9688 (+)
Type: pfam
Location: 8945 - 9688 (+)
Gene ID: HRGMv2_2054_28_10
Type: CAZyme
Location: 9689 - 10792 (+)
Type: CAZyme
Location: 9689 - 10792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2054_28_9 | vegan > omnivore | 1.15444 | 0.00933 |