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Cluster: HRGMv2_2054_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2054_24 HRGMv2_2054_24_10 10252 10761 + 2.A.87.3.2
CAZyme HRGMv2_2054_24 HRGMv2_2054_24_11 10865 17026 - GH2 | GH2
NULL(UNKNOWN) HRGMv2_2054_24 HRGMv2_2054_24_12 17869 18237 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2054_24 HRGMv2_2054_24_13 18430 19500 - 3.A.1.2.3
TC HRGMv2_2054_24 HRGMv2_2054_24_14 19516 21012 - 3.A.1.2.3
STP HRGMv2_2054_24 HRGMv2_2054_24_15 21154 22383 - Peripla_BP_1 | Peripla_BP_3
STP HRGMv2_2054_24 HRGMv2_2054_24_16 22544 23563 - Peripla_BP_1
TC HRGMv2_2054_24 HRGMv2_2054_24_17 23550 25283 - 9.B.33.1.1
Gene ID: HRGMv2_2054_24_10
Type: TC
Location: 10252 - 10761 (+)
Gene ID: HRGMv2_2054_24_11
Type: CAZyme
Location: 10865 - 17026 (-)
Gene ID: HRGMv2_2054_24_12
Type:
Location: 17869 - 18237 (-)
Gene ID: HRGMv2_2054_24_13
Type: TC
Location: 18430 - 19500 (-)
Gene ID: HRGMv2_2054_24_14
Type: TC
Location: 19516 - 21012 (-)
Gene ID: HRGMv2_2054_24_15
Type: STP
Location: 21154 - 22383 (-)
Gene ID: HRGMv2_2054_24_16
Type: STP
Location: 22544 - 23563 (-)
Gene ID: HRGMv2_2054_24_17
Type: TC
Location: 23550 - 25283 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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