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Cluster: HRGMv2_2054_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2054_13 HRGMv2_2054_13_5 2330 6892 + GH2
CAZyme HRGMv2_2054_13 HRGMv2_2054_13_6 7084 11757 + GH2
TC HRGMv2_2054_13 HRGMv2_2054_13_7 11822 13522 - 1.A.11.2.7
pfam HRGMv2_2054_13 HRGMv2_2054_13_8 13540 14457 - SBF | Mem_trans
TC HRGMv2_2054_13 HRGMv2_2054_13_9 14462 15439 - 3.A.1.5.20
TC HRGMv2_2054_13 HRGMv2_2054_13_10 15502 16500 - 3.A.1.5.35
TC HRGMv2_2054_13 HRGMv2_2054_13_11 16573 17436 - 3.A.1.5.38
TC HRGMv2_2054_13 HRGMv2_2054_13_12 17452 18411 - 3.A.1.5.11
TC HRGMv2_2054_13 HRGMv2_2054_13_13 18505 20145 - 3.A.1.5.4
Gene ID: HRGMv2_2054_13_5
Type: CAZyme
Location: 2330 - 6892 (+)
Gene ID: HRGMv2_2054_13_6
Type: CAZyme
Location: 7084 - 11757 (+)
Gene ID: HRGMv2_2054_13_7
Type: TC
Location: 11822 - 13522 (-)
Gene ID: HRGMv2_2054_13_8
Type: pfam
Location: 13540 - 14457 (-)
Gene ID: HRGMv2_2054_13_9
Type: TC
Location: 14462 - 15439 (-)
Gene ID: HRGMv2_2054_13_10
Type: TC
Location: 15502 - 16500 (-)
Gene ID: HRGMv2_2054_13_11
Type: TC
Location: 16573 - 17436 (-)
Gene ID: HRGMv2_2054_13_12
Type: TC
Location: 17452 - 18411 (-)
Gene ID: HRGMv2_2054_13_13
Type: TC
Location: 18505 - 20145 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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