Cluster: HRGMv2_2054_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2054_1 | HRGMv2_2054_1_30 | 40868 | 44350 | + | GH3 |
| CAZyme | HRGMv2_2054_1 | HRGMv2_2054_1_31 | 44632 | 47769 | + | GH3 |
| pfam | HRGMv2_2054_1 | HRGMv2_2054_1_32 | 47972 | 49360 | + | Lyase_1 | ASL_C2 |
| pfam | HRGMv2_2054_1 | HRGMv2_2054_1_33 | 49485 | 50570 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | HRGMv2_2054_1 | HRGMv2_2054_1_34 | 50774 | 51661 | + | 3.A.1.126.1 |
| pfam | HRGMv2_2054_1 | HRGMv2_2054_1_35 | 51654 | 52457 | + | ABC2_membrane_2 |
| TC | HRGMv2_2054_1 | HRGMv2_2054_1_36 | 52561 | 54597 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_2054_1_30
Type: CAZyme
Location: 40868 - 44350 (+)
Type: CAZyme
Location: 40868 - 44350 (+)
Gene ID: HRGMv2_2054_1_31
Type: CAZyme
Location: 44632 - 47769 (+)
Type: CAZyme
Location: 44632 - 47769 (+)
Gene ID: HRGMv2_2054_1_32
Type: pfam
Location: 47972 - 49360 (+)
Type: pfam
Location: 47972 - 49360 (+)
Gene ID: HRGMv2_2054_1_33
Type: pfam
Location: 49485 - 50570 (+)
Type: pfam
Location: 49485 - 50570 (+)
Gene ID: HRGMv2_2054_1_34
Type: TC
Location: 50774 - 51661 (+)
Type: TC
Location: 50774 - 51661 (+)
Gene ID: HRGMv2_2054_1_35
Type: pfam
Location: 51654 - 52457 (+)
Type: pfam
Location: 51654 - 52457 (+)
Gene ID: HRGMv2_2054_1_36
Type: TC
Location: 52561 - 54597 (+)
Type: TC
Location: 52561 - 54597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.