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Cluster: HRGMv2_2043_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2043_3 HRGMv2_2043_3_22 23644 30852 - CBM32 | CBM32 | CBM32 | GH81
TC HRGMv2_2043_3 HRGMv2_2043_3_23 31211 33595 - 9.A.8.1.6
TC HRGMv2_2043_3 HRGMv2_2043_3_24 34014 34583 + 3.A.1.25.5
TC HRGMv2_2043_3 HRGMv2_2043_3_25 34689 35465 - 2.A.5.5.2
TC HRGMv2_2043_3 HRGMv2_2043_3_26 35938 38535 - 3.A.3.5.15
pfam HRGMv2_2043_3 HRGMv2_2043_3_27 38669 39034 - Trns_repr_metal
pfam HRGMv2_2043_3 HRGMv2_2043_3_28 39433 40350 - SUFBD_core
TC HRGMv2_2043_3 HRGMv2_2043_3_29 40362 41090 - 3.A.1.6.7
Gene ID: HRGMv2_2043_3_22
Type: CAZyme
Location: 23644 - 30852 (-)
Gene ID: HRGMv2_2043_3_23
Type: TC
Location: 31211 - 33595 (-)
Gene ID: HRGMv2_2043_3_24
Type: TC
Location: 34014 - 34583 (+)
Gene ID: HRGMv2_2043_3_25
Type: TC
Location: 34689 - 35465 (-)
Gene ID: HRGMv2_2043_3_26
Type: TC
Location: 35938 - 38535 (-)
Gene ID: HRGMv2_2043_3_27
Type: pfam
Location: 38669 - 39034 (-)
Gene ID: HRGMv2_2043_3_28
Type: pfam
Location: 39433 - 40350 (-)
Gene ID: HRGMv2_2043_3_29
Type: TC
Location: 40362 - 41090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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