Cluster: HRGMv2_2043_CGC5
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_1 | HRGMv2_2043_1_170 | 188735 | 191245 | + | 9.A.8.1.6 |
| TF | HRGMv2_2043_1 | HRGMv2_2043_1_171 | 191532 | 192242 | + | LytTR |
| pfam | HRGMv2_2043_1 | HRGMv2_2043_1_172 | 192242 | 193567 | + | HATPase_c_5 |
| CAZyme | HRGMv2_2043_1 | HRGMv2_2043_1_173 | 193754 | 196681 | + | GH3 |
| CAZyme | HRGMv2_2043_1 | HRGMv2_2043_1_174 | 197182 | 199605 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2043_1 | HRGMv2_2043_1_175 | 199701 | 200285 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2043_1 | HRGMv2_2043_1_176 | 200486 | 201664 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_2043_1 | HRGMv2_2043_1_177 | 201818 | 203170 | + | 2.A.66.1.33 |
| TC | HRGMv2_2043_1 | HRGMv2_2043_1_178 | 203232 | 204023 | - | 9.B.141.1.2 |
| pfam | HRGMv2_2043_1 | HRGMv2_2043_1_179 | 204014 | 205135 | - | YibE_F |
| TC | HRGMv2_2043_1 | HRGMv2_2043_1_180 | 205496 | 206050 | + | 9.B.105.1.3 |
| pfam | HRGMv2_2043_1 | HRGMv2_2043_1_181 | 206235 | 207779 | - | Peptidase_M15_4 |
| TF | HRGMv2_2043_1 | HRGMv2_2043_1_182 | 208335 | 208709 | + | GntR |
| TC | HRGMv2_2043_1 | HRGMv2_2043_1_183 | 208711 | 209574 | + | 3.A.1.149.1 |
Gene ID: HRGMv2_2043_1_170
Type: TC
Location: 188735 - 191245 (+)
Type: TC
Location: 188735 - 191245 (+)
Gene ID: HRGMv2_2043_1_171
Type: TF
Location: 191532 - 192242 (+)
Type: TF
Location: 191532 - 192242 (+)
Gene ID: HRGMv2_2043_1_172
Type: pfam
Location: 192242 - 193567 (+)
Type: pfam
Location: 192242 - 193567 (+)
Gene ID: HRGMv2_2043_1_173
Type: CAZyme
Location: 193754 - 196681 (+)
Type: CAZyme
Location: 193754 - 196681 (+)
Gene ID: HRGMv2_2043_1_174
Type: CAZyme
Location: 197182 - 199605 (+)
Type: CAZyme
Location: 197182 - 199605 (+)
Gene ID: HRGMv2_2043_1_175
Type:
Location: 199701 - 200285 (+)
Type:
Location: 199701 - 200285 (+)
Gene ID: HRGMv2_2043_1_176
Type: pfam
Location: 200486 - 201664 (+)
Type: pfam
Location: 200486 - 201664 (+)
Gene ID: HRGMv2_2043_1_177
Type: TC
Location: 201818 - 203170 (+)
Type: TC
Location: 201818 - 203170 (+)
Gene ID: HRGMv2_2043_1_178
Type: TC
Location: 203232 - 204023 (-)
Type: TC
Location: 203232 - 204023 (-)
Gene ID: HRGMv2_2043_1_179
Type: pfam
Location: 204014 - 205135 (-)
Type: pfam
Location: 204014 - 205135 (-)
Gene ID: HRGMv2_2043_1_180
Type: TC
Location: 205496 - 206050 (+)
Type: TC
Location: 205496 - 206050 (+)
Gene ID: HRGMv2_2043_1_181
Type: pfam
Location: 206235 - 207779 (-)
Type: pfam
Location: 206235 - 207779 (-)
Gene ID: HRGMv2_2043_1_182
Type: TF
Location: 208335 - 208709 (+)
Type: TF
Location: 208335 - 208709 (+)
Gene ID: HRGMv2_2043_1_183
Type: TC
Location: 208711 - 209574 (+)
Type: TC
Location: 208711 - 209574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.