Cluster: HRGMv2_2043_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_18 | HRGMv2_2043_18_15 | 11266 | 12630 | + | 2.A.66.1.32 |
| pfam | HRGMv2_2043_18 | HRGMv2_2043_18_16 | 12632 | 12940 | + | GIY-YIG |
| TF | HRGMv2_2043_18 | HRGMv2_2043_18_17 | 13087 | 13557 | + | MarR |
| TC | HRGMv2_2043_18 | HRGMv2_2043_18_18 | 13559 | 15823 | + | 3.A.1.135.6 |
| TC | HRGMv2_2043_18 | HRGMv2_2043_18_19 | 15816 | 17681 | + | 3.A.1.135.6 |
| CAZyme | HRGMv2_2043_18 | HRGMv2_2043_18_20 | 17926 | 20829 | + | GH55_3 |
| CAZyme | HRGMv2_2043_18 | HRGMv2_2043_18_21 | 20822 | 22687 | + | GH55_1 |
Gene ID: HRGMv2_2043_18_15
Type: TC
Location: 11266 - 12630 (+)
Type: TC
Location: 11266 - 12630 (+)
Gene ID: HRGMv2_2043_18_16
Type: pfam
Location: 12632 - 12940 (+)
Type: pfam
Location: 12632 - 12940 (+)
Gene ID: HRGMv2_2043_18_17
Type: TF
Location: 13087 - 13557 (+)
Type: TF
Location: 13087 - 13557 (+)
Gene ID: HRGMv2_2043_18_18
Type: TC
Location: 13559 - 15823 (+)
Type: TC
Location: 13559 - 15823 (+)
Gene ID: HRGMv2_2043_18_19
Type: TC
Location: 15816 - 17681 (+)
Type: TC
Location: 15816 - 17681 (+)
Gene ID: HRGMv2_2043_18_20
Type: CAZyme
Location: 17926 - 20829 (+)
Type: CAZyme
Location: 17926 - 20829 (+)
Gene ID: HRGMv2_2043_18_21
Type: CAZyme
Location: 20822 - 22687 (+)
Type: CAZyme
Location: 20822 - 22687 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.